Chromium™ Single Cell Controller

A Powerful Solution for Single Cell Discovery

The Chromium™ Single Cell Controller gives every lab the power to perform single cell RNA sequencing. The new controller is part of our Chromium Single Cell Solution providing a comprehensive, scalable solution for cell characterization and gene expression profiling of hundreds to millions of cells. Affordable and with a simplified workflow, users can go from cell sample to sequencing library in less than one workday.


    • Massive throughput and superior sensitivity
    • Capture up to 100-80,000+ cells in 10 minutes
    • Identify and characterize rare cell types
    • Easy-to-use workflow compared to other methods
    • Complete workflow in one day
    • No lower size limit on cells
    • Throughput flexibility
    • Cell capture efficiency up to 65%
    • Compatible with Illumina® HiSeq® 4000/2500/NextSeq®/MiSeq® sequencers

The Chromium System, powered by GemCode™ Technology, is an innovative system that transforms the capability of existing short-read sequencers. With millions of uniquely addressable partitions, the Chromium System unlocks critical genomic information.

With Chromium Single Cell 3’, perform deep profiling of complex cell populations with massive throughput digital gene expression on a cell-by-cell basis. Trace expression profiles to individual cells to ensure biologically relevant signals are not masked by bulk average measurements.

Chromium Single Cell Gene Expression Solution

The Chromium Single Cell Gene Expression Solution provides high-throughput, single cell expression measurements that enable discovery of gene expression dynamics and molecular profiling of individual cell types.

Chromium Single Cell Immune Profiling Solution

The Chromium Single Cell Immune Profiling Solution is a comprehensive, scalable tool for profiling full-length paired V(D)J transcripts from hundreds to millions of lymphocytes. The new solution enables assembly of full-length V(D)J sequences on a cell-by-cell basis, providing high resolution insights into the adaptive immune system.

Chromium Single Cell CNV Solution

The Chromium Single Cell CNV Solution provides a comprehensive, scalable solution for revealing genome heterogeneity and understanding clonal evolution. Study disease pathogenesis or characterize neuronal mosaicism at the single cell level.

  • Stem Cell Biology
  • Tumor Heterogeneity
  • Rare Cell Detection
  • Immunology
  • Cell Ranger: Pipelines
  • Cell Ranger: R Kit
  • Loupe™ Cell Browser

10x Genomics Chromium Single Cell